Rat Genome Database

annotations-count/{acc Id}-{species Type Key}/{include Children}

Returns annotation count for ontology accession ID and object type Returns annotation count for ontology accession ID and speicies

annotations-count/{acc Id}

Returns annotation count for ontology accession ID

annotations-rgd Id/{rgd Id}

Returns a list of annotations by RGD ID and ontology prefix Returns a list of annotations by RGD ID

annotations-{acc Id}

Returns a list of annotations by RGD ID and ontology term accession ID Returns a list annotations for an ontology term or a term and it's children

Returns a list of annotations for a reference Returns a list ontology term accession IDs annotated to an rgd object

Return a list of genes for an alias and species Return a list of all genes with position information for an assembly Return a list of gene orthologs Return a list of genes by keyword and species type key Get a gene record by RGD ID Return a list of genes position and map key Get a gene record by symbol and species type key Return a list of genes for an affymetrix ID Return a list of genes annotated to an ontology term Return a list of all genes for a species in RGD Return a list of gene alleles

Return a Map of species type keys available in RGD Return a list assembly maps for a species Returns a list of gene types avialable in RGD

Return a list of pathways based on category provided Return a list of pathways based on search term

Return a QTL for provided RGD ID Returns a list QTL for given position and assembly map

Count of objects with given status, for specified species and date Count of protein interactions, for specified species and date Count of withdrawn objects by type, for specified species and date Count of objects with external database ids, by database id, for specified species, object type and date Count of active objects by type, for specified species and date Count of objects with reference, by object type, for specified species and date Count of strains, by qtl inheritance type, for specified species and date Count of external database ids, for specied species and date Count of gene types, for specified species and date Count of retired objects by type, for specified species and date Count of objects with reference sequence(s), by object type, for specified species and date Count of strain types, for specified species and date

Count difference of retired objects, by type, for specified species and date range Count difference of external database ids, for specified species and date range Count difference of objects with reference sequence(s), by object type, for specified species and date range Count difference of withdrawn objects, by type, for specified species and date range Count difference of active objects, by type, for specified species and date range Count difference of objects with reference, by object type, for specified species and date range Count difference of strain types, for specified species and date range Count difference of gene types, for specified species and date range Count difference of objects with given status, for specified species and date range Count difference of protein interactions, for specified species and date range Count difference of objects with external database ids, by database id, for specified species, object type and date range Count difference of strains, by qtl inheritance type, for specified species and date range

Return a strain by RGD ID Return all active strains by position Return all active strains in RGD

Return a list of pathways based on search term and species type. 3=rat 4=chinchilla

Rat Genome Database

annotations-count/{acc Id}-{species Type Key}/{include Children}

Returns annotation count for ontology accession ID and object type Returns annotation count for ontology accession ID and speicies

annotations-count/{acc Id}

Returns annotation count for ontology accession ID

annotations-rgd Id/{rgd Id}

Returns a list of annotations by RGD ID and ontology prefix Returns a list of annotations by RGD ID

annotations-{acc Id}

Returns a list of annotations by RGD ID and ontology term accession ID Returns a list annotations for an ontology term or a term and it's children

Returns a list of annotations for a reference Returns a list ontology term accession IDs annotated to an rgd object

Return a list of genes for an alias and species Return a list of all genes with position information for an assembly Return a list of gene orthologs Return a list of genes by keyword and species type key Get a gene record by RGD ID Return a list of genes position and map key Get a gene record by symbol and species type key Return a list of genes for an affymetrix ID Return a list of genes annotated to an ontology term Return a list of all genes for a species in RGD Return a list of gene alleles

Return a Map of species type keys available in RGD Return a list assembly maps for a species Returns a list of gene types avialable in RGD

Return a list of pathways based on category provided Return a list of pathways based on search term

Return a QTL for provided RGD ID Returns a list QTL for given position and assembly map

Count of objects with given status, for specified species and date Count of protein interactions, for specified species and date Count of withdrawn objects by type, for specified species and date Count of objects with external database ids, by database id, for specified species, object type and date Count of active objects by type, for specified species and date Count of objects with reference, by object type, for specified species and date Count of strains, by qtl inheritance type, for specified species and date Count of external database ids, for specied species and date Count of gene types, for specified species and date Count of retired objects by type, for specified species and date Count of objects with reference sequence(s), by object type, for specified species and date Count of strain types, for specified species and date

Count difference of retired objects, by type, for specified species and date range Count difference of external database ids, for specified species and date range Count difference of objects with reference sequence(s), by object type, for specified species and date range Count difference of withdrawn objects, by type, for specified species and date range Count difference of active objects, by type, for specified species and date range Count difference of objects with reference, by object type, for specified species and date range Count difference of strain types, for specified species and date range Count difference of gene types, for specified species and date range Count difference of objects with given status, for specified species and date range Count difference of protein interactions, for specified species and date range Count difference of objects with external database ids, by database id, for specified species, object type and date range Count difference of strains, by qtl inheritance type, for specified species and date range

Return a strain by RGD ID Return all active strains by position Return all active strains in RGD

Return a list of pathways based on search term and species type. 3=rat 4=chinchilla

Home Rat Genome Database qtlsReturns a list QTL for given position and assembly map

Returns a list QTL for given position and assembly map

GET {{baseUrl}}/qtls/:chr/:start/:stop/:mapKey

Return a QTL for provided RGD ID