GeneLab
Number of APIs: 1
NASA GeneLab provides a RESTfulApplication Programming Interfaces (API) to its full-text search, and data
andmetadata retrieval capabilities. The API provides a choice of standard weboutput formats, either
JavaScript Object Notation (JSON) or Hyper Text MarkupLanguage (HTML), of query results. The GeneLab Data
Query API returns metadataon data files associated with dataset(s), including
the location of these filesfor download via https. The GeneLabMetadata Query API returns entire sets of
metadata for inputdataset accession numbers. TheGeneLab Dataset Search API
can be used to searchdataset metadata by keywords and/or metadata. It can also be
usedto provide search of three other omics databases: the National Institutes ofHealth (NIH) /
National Center for Biotechnology Information's (NCBI) GeneExpression Omnibus (GEO); the European
Bioinformatics Institute's (EBI)Proteomics Identification (PRIDE); the Argonne National Laboratory's
(ANL)Metagenomics Rapid Annotations using Subsystems Technology (MG-RAST). Parameters Data Type Notes Values Required {GLDS_STUDY_IDs} Integers Comma separated list with mixture of single GLDS accession numbers and ranges ex. 87-95,137 Yes {CURRENT_PAGE_NUMBER} Integer Current page number in pagination Starts from 0 No
{RESULTS_PER_PAGE} Integer Number of results returned per page in pagination Max 25 results per page
No https://genelab-data.ndc.nasa.gov/genelab/data/glds/meta/{GLDS_STUDY_ID} Parameters Data Type Notes Values Required {GLDS_STUDY_ID} Integer Single GLDS accession number Example: 87 Yes https://genelab-data.ndc.nasa.gov/genelab/data/search?<PARAMETER-LIST> parameters definition values term search keyword string from starting page
integer (single value)
size search result display count integer (single value) type datasource cgene , nih_geo, ebi_pride, mg_rast
(accepts multiple value separated by comma separated) sort sort field string (Field Name) order sort order ASC - ascending order; DESC - descending order ffield filter field string (should always be pared with fvalue); append .raw to the end of the field
to use the exact match index; see metadata queries above for field names and example values
fvalue filter value string (should always be pared with ffield) POST and GET requests accept the URL encodedname/value pairs for submission Example:
https://genelab-data.ndc.nasa.gov/genelab/data/search?term=space&from=0&type=cgene,nih_geo_gse&ffield=links&fvalue=GPL16417&ffield=Data%20Source%20Accession.raw&fvalue=GSE82255
Example:
https://genelab-data.ndc.nasa.gov/genelab/search_studies/?q=cancer&data_source=cgene
https://genelab-data.ndc.nasa.gov/genelab/search_studies/?q=mouse%20AND%20liver&data_source=cgene
Data sources Datasource Query Parameter Usage C-GENE cgene Search authoritative data records in NASA GeneLab Data Repository NIH GSE nih_geo_gse Search authoritative data records in NIH Gene Expression Omnibus database EBI ebi_pride Search authoritative data records in the European Bioinformatics Institute Proteomics
Identification database MG-RAST mg_rast Search authoritative data records in the Metagenomic Rapid Annotations using
Subsystems Technology database Boolean Operators Operator AND ALL search terms must be present (default booleansearch)
OR ANY of your search terms can be present NOT exclude words from your search If no conjunctive or disjunctive operator specified, the default is "AND" GeneLab Public API
Data Query API
Syntax
Returns: JSON-formatted response
Example requests:
NOTE: study_files element in the JSON response has
the remote_url attribute, which can be used to
obtain the specific download URL for the file by prefacing with the GeneLab data server address,
https://genelab-data.ndc.nasa.gov . In the
example query/response below, the first study file for GLDS-87 study in the response below can be downloaded
from https://genelab-data.ndc.nasa.gov/datamanager/file/Home/genelab/genelab-data/GLDS-87/metadata/GLDS-87_metadata_Zanello_STS135-ISA.zip
Example Requests:
Single Study Request:
·
https://genelab-data.ndc.nasa.gov/genelab/data/glds/files/87
Response:
{
"hits": 1,
"input": "87",
"studies": {
"GLDS-87": {
"file_count": 7,
"study_files": [
{
"date_created": 1516405876433,
"file_name": "GLDS-87_metadata_Zanello_STS135-ISA.zip",
"file_size": 4809,
"remote_url": "/datamanager/file/Home/genelab/genelab-data/GLDS-87/metadata/GLDS-87_metadata_Zanello_STS135-ISA.zip"
},
{
"date_created": 1506008634109,
"file_name": "GLDS-87_microarray_14R_(Mouse430_2).CEL.gz",
"file_size": 6374949,
"remote_url": "/datamanager/file/Home/Public/genelab/GLDS-87/microarray/GLDS-87_microarray_14R_(Mouse430_2).CEL.gz"
},
{
"date_created": 1506008634109,
"file_name": "GLDS-87_microarray_16R_(Mouse430_2).CEL.gz",
"file_size": 6274393,
"remote_url": "/datamanager/file/Home/Public/genelab/GLDS-87/microarray/GLDS-87_microarray_16R_(Mouse430_2).CEL.gz"
},
{
"date_created": 1506008634109,
"file_name": "GLDS-87_microarray_20R_(Mouse430_2).CEL.gz",
"file_size": 6384622,
"remote_url": "/datamanager/file/Home/Public/genelab/GLDS-87/microarray/GLDS-87_microarray_20R_(Mouse430_2).CEL.gz"
},
{
"date_created": 1506008634109,
"file_name": "GLDS-87_microarray_52R_(Mouse430_2).CEL.gz",
"file_size": 6297226,
"remote_url": "/datamanager/file/Home/Public/genelab/GLDS-87/microarray/GLDS-87_microarray_52R_(Mouse430_2).CEL.gz"
},
{
"date_created": 1506008634109,
"file_name": "GLDS-87_microarray_54R_(Mouse430_2).CEL.gz",
"file_size": 6017124,
"remote_url": "/datamanager/file/Home/Public/genelab/GLDS-87/microarray/GLDS-87_microarray_54R_(Mouse430_2).CEL.gz"
},
{
"date_created": 1506008634109,
"file_name": "GLDS-87_microarray_58R_(Mouse430_2).CEL.gz",
"file_size": 6329707,
"remote_url": "/datamanager/file/Home/Public/genelab/GLDS-87/microarray/GLDS-87_microarray_58R_(Mouse430_2).CEL.gz"
}
]
}
},
"success": true,
"total_hits": 2,
"valid_input": [
"87"
]
} Multiple Study Data Files Request:
Response:
{
"hits": 3,
"input": "137,86-87",
"studies": {
"GLDS-137": {
"study_files": [
{
"file_name": "GLDS-137_metadata_RR3-Liver.zip",
"remote_url": "/datamanager/file/Home/genelab/genelab-data/GLDS-137/metadata/GLDS-137_metadata_RR3-Liver.zip",
"file_size": 9408,
"date_created": 1522174143201
},
{
"file_name": "GLDS-137_transcriptomics_RR3-BSL-B1.tar.gz",
"remote_url": "/datamanager/file/Home/Public/genelab/GLDS-137/transcriptomics/GLDS-137_transcriptomics_RR3-BSL-B1.tar.gz",
"file_size": 14879922202,
"date_created": 1506008636839
},
{
"file_name": "GLDS-137_transcriptomics_RR3-BSL-B2.tar.gz",
"remote_url": "/datamanager/file/Home/Public/genelab/GLDS-137/transcriptomics/GLDS-137_transcriptomics_RR3-BSL-B2.tar.gz",
"file_size": 15103810246,
"date_created": 1506008636839
},
...
...
{
"file_name": "GLDS-137_proteomics_RR3_Liver_raw.tar.gz",
"remote_url": "/datamanager/file/Home/Public/genelab/GLDS-137/proteomics/GLDS-137_proteomics_RR3_Liver_raw.tar.gz",
"file_size": 19986955105,
"date_created": 1506008636839
}
],
"file_count": 39,
"study_metadata": {
"date_created": 1522174145534,
"isa2json": {
...
...
},
"date_modified": 1522174145534
}
},
"GLDS-87": {
"study_files": [
{
"file_name": "GLDS-87_metadata_Zanello_STS135-ISA.zip",
"remote_url": "/datamanager/file/Home/genelab/genelab-data/GLDS-87/metadata/GLDS-87_metadata_Zanello_STS135-ISA.zip",
"file_size": 4809,
"date_created": 1516405876433
},
{
"file_name": "GLDS-87_microarray_14R_(Mouse430_2).CEL.gz",
"remote_url": "/datamanager/file/Home/Public/genelab/GLDS-87/microarray/GLDS-87_microarray_14R_(Mouse430_2).CEL.gz",
"file_size": 6374949,
"date_created": 1506008634109
},
{
"file_name": "GLDS-87_microarray_16R_(Mouse430_2).CEL.gz",
"remote_url": "/datamanager/file/Home/Public/genelab/GLDS-87/microarray/GLDS-87_microarray_16R_(Mouse430_2).CEL.gz",
"file_size": 6274393,
"date_created": 1506008634109
},
{
"file_name": "GLDS-87_microarray_20R_(Mouse430_2).CEL.gz",
"remote_url": "/datamanager/file/Home/Public/genelab/GLDS-87/microarray/GLDS-87_microarray_20R_(Mouse430_2).CEL.gz",
"file_size": 6384622,
"date_created": 1506008634109
},
{
"file_name": "GLDS-87_microarray_52R_(Mouse430_2).CEL.gz",
"remote_url": "/datamanager/file/Home/Public/genelab/GLDS-87/microarray/GLDS-87_microarray_52R_(Mouse430_2).CEL.gz",
"file_size": 6297226,
"date_created": 1506008634109
},
{
"file_name": "GLDS-87_microarray_54R_(Mouse430_2).CEL.gz",
"remote_url": "/datamanager/file/Home/Public/genelab/GLDS-87/microarray/GLDS-87_microarray_54R_(Mouse430_2).CEL.gz",
"file_size": 6017124,
"date_created": 1506008634109
},
{
"file_name": "GLDS-87_microarray_58R_(Mouse430_2).CEL.gz",
"remote_url": "/datamanager/file/Home/Public/genelab/GLDS-87/microarray/GLDS-87_microarray_58R_(Mouse430_2).CEL.gz",
"file_size": 6329707,
"date_created": 1506008634109
}
],
"file_count": 7,
"study_metadata": {
"date_created": 1516405879029,
"isa2json": {
...
...
},
"date_modified": 1516405879029
}
},
"GLDS-86": {
"study_files": [
{
"file_name": "GLDS-86_metadata_GSE65477-ISA.zip",
"remote_url": "/datamanager/file/Home/Public/genelab/GLDS-86/metadata/GLDS-86_metadata_GSE65477-ISA.zip",
"file_size": 4659,
"date_created": 1506008635554
},
{
"file_name": "GLDS-86_epigenomics_SRR1781971_1.fastq.gz",
"remote_url": "/datamanager/file/Home/Public/genelab/GLDS-86/epigenomics/GLDS-86_epigenomics_SRR1781971_1.fastq.gz",
"file_size": 1438278406,
"date_created": 1506008635554
},
{
"file_name": "GLDS-86_epigenomics_SRR1781971_2.fastq.gz",
"remote_url": "/datamanager/file/Home/Public/genelab/GLDS-86/epigenomics/GLDS-86_epigenomics_SRR1781971_2.fastq.gz",
"file_size": 1425601005,
"date_created": 1506008635554
},
{
"file_name": "GLDS-86_epigenomics_SRR1781972_1.fastq.gz",
"remote_url": "/datamanager/file/Home/Public/genelab/GLDS-86/epigenomics/GLDS-86_epigenomics_SRR1781972_1.fastq.gz",
"file_size": 1432085756,
"date_created": 1506008635554
},
...
...
{
"file_name": "GLDS-86_epigenomics_SRR1781978_2.fastq.gz",
"remote_url": "/datamanager/file/Home/Public/genelab/GLDS-86/epigenomics/GLDS-86_epigenomics_SRR1781978_2.fastq.gz",
"file_size": 3851398439,
"date_created": 1506008635554
}
],
"file_count": 17,
"study_metadata": {
"date_created": 1506008631030,
"isa2json": {
...
...
},
"date_modified": 1506008631030
}
}
},
"success": true,
"total_hits": 3,
"valid_input": ["86, "87", "137"]
}
GeneLab MetadataAPI
Syntax
Single StudyMetadata Request:
Returns: JSON-formatted response
Response:
{
"hits": 1,
"input": "137",
"study": {
"GLDS-137": {
"isa2json": {
"additionalInformation": {
"assays": {
"a_rr3_liver_DNA_methylation_profiling_nucleotide_sequencing-txt": {
"header": [
{
"encoded": false,
"field": "a100000samplename",
"title": "Sample Name",
"width": 200
},
...
...
{
"encoded": false,
"field": "a100022deriveddatafile",
"title": "Derived Data File",
"width": 200
},
{
"columns": [
{
"encoded": false,
"field": "a100017commentexport",
"title": "Export",
"width": 200
}
],
"title": "Comment"
}
],
"raw": [
{
"a100000samplename": "RR3_BSL_B1_LVR",
"a100001protocolref": "nucleic acid extraction",
...
...
"a100022deriveddatafile": ""
},
...
...
{
"a100000samplename": "RR3_GC_G7_LVR",
"a100001protocolref": "nucleic acid extraction",
...
...
"a100022deriveddatafile": ""
}
],
"table": [
{
"a100000samplename": "RR3_BSL_B1_LVR",
"a100001protocolref": "nucleic acid extraction",
...
...
"a100022deriveddatafile": ""
},
...
...
{
"a100000samplename": "RR3_GC_G7_LVR",
"a100001protocolref": "nucleic acid extraction",
...
...
"a100022deriveddatafile": ""
}
]
},
"a_rr3_liver_protein_expression_profiling_mass_spectrometry-txt": {
"header": [
{
"encoded": false,
"field": "a100000samplename",
"title": "Sample Name",
"width": 200
},
...
...
{
"encoded": false,
"field": "a100033proteinassignmentfile",
"title": "Protein Assignment File",
"width": 200
},
{
"columns": [
{
"encoded": false,
"field": "a100001commentcorefacilitysamplename",
"title": "Core Facility Sample Name",
"width": 200
},
...
...
{
"encoded": false,
"field": "a100034commentbyonicoutputfile",
"title": "Byonic Output File",
"width": 200
}
],
"title": "Comment"
}
],
"raw": [
{
"a100000samplename": "RR3_BSL_B1_LVR",
"a100001commentcorefacilitysamplename": "B1",
...
...
"a100034commentbyonicoutputfile": "170322_SHLai....byspec2_20170326_Byonic.mzid"
},
...
...
{
"a100000samplename": "RR3_FLT_F6_LVR",
"a100001commentcorefacilitysamplename": "F6",
...
...
"a100034commentbyonicoutputfile": "170322_SHLai....byspec2_20170326_Byonic.mzid"
}
],
"table": [
{
"a100000samplename": "RR3_BSL_B1_LVR",
"a100001commentcorefacilitysamplename": "B1",
...
...
"a100034commentbyonicoutputfile": "170322_SHLai....byspec2_20170326_Byonic.mzid"
},
...
...
{
"a100000samplename": "RR3_FLT_F6_LVR",
"a100001commentcorefacilitysamplename": "F6",
...
...
"a100034commentbyonicoutputfile": "170322_SHLai....byspec2_20170326_Byonic.mzid"
}
]
},
"a_rr3_liver_transcription_profiling_nucleotide_sequencing-txt": {
"header": [
...
...
],
"raw": [
...
...
],
"table": [
...
...
]
}
},
"description": {
"assays": [
{
"Assay Type": "transcription profiling",
"Device Platform": "Illumina",
"Device Type": "nucleotide
sequencing"
},
{
"Assay Type": "protein expression profiling",
"Device Platform": "LTQ Orbitrap Velos (Thermo Scientific)",
"Device Type": "mass spectrometry"
},
{
"Assay Type": "DNA methylation profiling",
"Device Platform": "Illumina",
"Device Type": "nucleotide sequencing"
}
],
"factors": [
{
"Ontology: Concept": "Weightlessness",
"factor": "Microgravity"
},
{
"Ontology: Concept": "treatment",
"factor": "Treatment"
}
]
},
"ontologies": {
"OBI:0000626": {
"@context": {
"@vocab": "http://data.bioontology.org/metadata/",
"cui": "http://data.bioontology.org/metadata/umlscui",
"definition": "http://data.bioontology.org/metadata/skosdefinition",
"obsolete": "http://data.bioontology.org/metadata/owlobsolete",
"prefLabel": "http://data.bioontology.org/metadata/skosprefLabel",
"semanticType": "http://data.bioontology.org/metadata/umlssemanticType",
"synonym": "http://data.bioontology.org/metadata/skossynonym"
},
"@id": "http://purl.obolibrary.org/obo/OBI_0000626",
"@type": "http://www.w3.org/2002/07/owl#Class",
"cui":
[],
"definition": [
"DNA sequencing is a sequencing process which uses deoxyribonucleic acid as input and results in a the creation of DNA sequence information artifact using a DNA sequencer instrument."
],
"links": {
"@context": {
"ancestors": "http://www.w3.org/2002/07/owl#Class",
"children": "http://www.w3.org/2002/07/owl#Class",
"descendants": "http://www.w3.org/2002/07/owl#Class",
"instances": "http://data.bioontology.org/metadata/Instance",
"mappings": "http://data.bioontology.org/metadata/Mapping",
"notes": "http://data.bioontology.org/metadata/Note",
"ontology": "http://data.bioontology.org/metadata/Ontology",
"parents": "http://www.w3.org/2002/07/owl#Class",
"self": "http://www.w3.org/2002/07/owl#Class",
"tree": "http://www.w3.org/2002/07/owl#Class",
"ui": "http://www.w3.org/2002/07/owl#Class"
},
"ancestors": "http://data.bioontology.org/ontologies/OBI/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FOBI_0000626/ancestors",
"children": "http://data.bioontology.org/ontologies/OBI/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FOBI_0000626/children",
"descendants": "http://data.bioontology.org/ontologies/OBI/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FOBI_0000626/descendants",
"instances": "http://data.bioontology.org/ontologies/OBI/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FOBI_0000626/instances",
"mappings": "http://data.bioontology.org/ontologies/OBI/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FOBI_0000626/mappings",
"notes": "http://data.bioontology.org/ontologies/OBI/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FOBI_0000626/notes",
"ontology": "http://data.bioontology.org/ontologies/OBI",
"parents": "http://data.bioontology.org/ontologies/OBI/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FOBI_0000626/parents",
"self": "http://data.bioontology.org/ontologies/OBI/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FOBI_0000626",
"tree": "http://data.bioontology.org/ontologies/OBI/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FOBI_0000626/tree",
"ui": "http://bioportal.bioontology.org/ontologies/OBI?p=classes&conceptid=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FOBI_0000626"
},
"obsolete": false,
"prefLabel": "DNA sequencing",
"semanticType": [],
"synonym": [
"nucleotide sequencing"
]
},
...
...
},
"organisms": {
"links": {
"musmusculus": "Mus musculus "
},
"ontologies": {
"musmusculus": {
"@context": {
"@vocab": "http://data.bioontology.org/metadata/",
"cui": "http://data.bioontology.org/metadata/umlscui",
"definition": "http://data.bioontology.org/metadata/skosdefinition",
"obsolete": "http://data.bioontology.org/metadata/owlobsolete",
"prefLabel": "http://data.bioontology.org/metadata/skosprefLabel",
"semanticType": "http://data.bioontology.org/metadata/umlssemanticType",
"synonym": "http://data.bioontology.org/metadata/skossynonym"
},
"@id": "http://purl.bioontology.org/ontology/NCBITAXON/10090",
"@type": "http://www.w3.org/2002/07/owl#Class",
"cui": [
"C0025914"
],
"definition": [],
"links": {
"@context": {
"ancestors": "http://www.w3.org/2002/07/owl#Class",
"children": "http://www.w3.org/2002/07/owl#Class",
"descendants": "http://www.w3.org/2002/07/owl#Class",
"instances": "http://data.bioontology.org/metadata/Instance",
"mappings": "http://data.bioontology.org/metadata/Mapping",
"notes": "http://data.bioontology.org/metadata/Note",
"ontology": "http://data.bioontology.org/metadata/Ontology",
"parents": "http://www.w3.org/2002/07/owl#Class",
"self": "http://www.w3.org/2002/07/owl#Class",
"tree": "http://www.w3.org/2002/07/owl#Class",
"ui": "http://www.w3.org/2002/07/owl#Class"
},
"ancestors": "http://data.bioontology.org/ontologies/NCBITAXON/classes/http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FNCBITAXON%2F10090/ancestors",
"children": "http://data.bioontology.org/ontologies/NCBITAXON/classes/http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FNCBITAXON%2F10090/children",
"descendants": "http://data.bioontology.org/ontologies/NCBITAXON/classes/http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FNCBITAXON%2F10090/descendants",
"instances": "http://data.bioontology.org/ontologies/NCBITAXON/classes/http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FNCBITAXON%2F10090/instances",
"mappings": "http://data.bioontology.org/ontologies/NCBITAXON/classes/http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FNCBITAXON%2F10090/mappings",
"notes": "http://data.bioontology.org/ontologies/NCBITAXON/classes/http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FNCBITAXON%2F10090/notes",
"ontology": "http://data.bioontology.org/ontologies/NCBITAXON",
"parents": "http://data.bioontology.org/ontologies/NCBITAXON/classes/http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FNCBITAXON%2F10090/parents",
"self": "http://data.bioontology.org/ontologies/NCBITAXON/classes/http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FNCBITAXON%2F10090",
"tree": "http://data.bioontology.org/ontologies/NCBITAXON/classes/http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FNCBITAXON%2F10090/tree",
"ui": "http://bioportal.bioontology.org/ontologies/NCBITAXON?p=classes&conceptid=http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FNCBITAXON%2F10090"
},
"obsolete": false,
"prefLabel": "Mus musculus",
"semanticType": [
"http://purl.bioontology.org/ontology/STY/T015"
],
"synonym": [
"mouse
]
}
}
},
"samples": {
"s_RR3_Liver-txt": {
"header": [
{
"encoded": false,
"field": "a100000sourcename",
"title": "Source Name",
"width": 200
},
...
...
{
"encoded": false,
"field": "a100047parametervaluesamplestoragemethod",
"title": "Parameter Value[Sample Storage Method]",
"width": 200
},
{
"columns": [
{
"encoded": false,
"field": "a100002characteristicsorganism",
"title": "Organism",
"width": 200
},
...
...
{
"encoded": false,
"field": "a100019characteristicscarcassweight",
"title": "Carcass weight",
"width": 200
}
],
"title": "Characteristics"
},
{
"columns": [
{
"encoded": false,
"field": "a100001commentsourcedescription",
"title": "Source description",
"width": 200
},
...
...
{
"encoded": false,
"field": "a100052commentlsdabiospecimensubjectid",
"title": "LSDA Biospecimen Subject ID",
"width": 200
}
],
"title": "Comment"
},
{
"columns": [
{
"encoded": false,
"field": "a100023factorvaluetreatment",
"title": "Treatment",
"width": 200
},
{
"encoded": false,
"field": "a100026factorvaluemicrogravity",
"title": "Microgravity",
"width": 200
}
],
"title": "Factor Value"
}
],
"raw": [
{
"a100000sourcename": "Liv-4 CB1",
"a100001commentsourcedescription": "previously dissected",
...
...
"a100051commentlsdabiospecimensourceid": "5417",
"a100052commentlsdabiospecimensubjectid": "551"
},
...
...
{
"a100000sourcename": "Liv-4 CF6",
"a100001commentsourcedescription": "previously dissected",
...
...
"a100051commentlsdabiospecimensourceid": "5415",
"a100052commentlsdabiospecimensubjectid": "549"
}
],
"table": [
{
"a100000sourcename": "Liv-4 CB1",
"a100001commentsourcedescription": "previously dissected",
...
...
"a100051commentlsdabiospecimensourceid": "5417",
"a100052commentlsdabiospecimensubjectid": "551 degree Celsius"
},
...
...
{
"a100000sourcename": "Liv-4 CF6",
"a100001commentsourcedescription": "previously dissected",
...
...
"a100051commentlsdabiospecimensourceid": "5415",
"a100052commentlsdabiospecimensubjectid": "549 degree Celsius"
}
]
}
}
},
"comments": [
{
"name": "Last Opened With Configuration",
"value": ""
},
{
"name": "Created with configuration",
"value": ""
},
{
"name": "Created With Configuration",
"value": ""
}
],
"description": "",
"identifier": "1499794379203",
"ontologySourceReferences": [
{
"description": "Medical Subject Headings",
"file": "http://data.bioontology.org/ontologies/MESH",
"name": "MESH",
"version": "13"
},
{
"description": "Ontology for Biomedical Investigations",
"file": "http://data.bioontology.org/ontologies/OBI",
"name": "OBI",
"version": "32"
},
...
...
{
"description": "Units of Measurement Ontology",
"file": "http://data.bioontology.org/ontologies/UO",
"name": "UO",
"version": "43"
},
{
"description": "",
"file": "",
"name": "",
"version": ""
}
],
"people": [],
"publicReleaseDate": "",
"publications": [],
"studies": [
{},
{}
],
"submissionDate": "",
"title": "Investigation"
}
}
},
"success": true
}
GLDS PublicRESTful Dataset Search API
Syntax 1 (returns JSON response)
Syntax2 (returns HTML response):
https://genelab-data.ndc.nasa.gov/genelab/search_studies/?q=<SEARCH-TERMS>&
data_source =<DATASOURCE (see tablebelow)>
1. GeneLab*
GET https://genelab-data.ndc.nasa.gov/genelab/data/glds/files/87